Drug2ways API

Drug2ways implements an API with multiple methods that facilitate its programmatic usage. The majority of this methods are similar to the ones in the CLI. They are located in cli_helper.py.

 from drug2ways.cli_helper import wrapper_explore
 from networkx import DiGraph

 # Initialize a directed graph
 directed_graph = nx.DiGraph()
 directed_graph.add_edges_from([(1, 2), (1, 3)])

 results, time_cache = wrapper_explore(
    graph=directed_graph, # directed graph
    source_nodes=[1], # list of source nodes
    target_nodes=[3], # list of target nodes
    lmax=2, # max length of the path
    simple_paths=True, # with or without cycles (True=no cycles are allowed)