Constants¶
Constants of drug2ways.
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drug2ways.constants.
DEFAULT_DRUG2WAYS_DIR
= '/home/docs/.drug2ways'¶ Default drug2ways directory
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drug2ways.constants.
download_pathway
(url: str, export_path: str) → None[source]¶ Make a function that downloads the data for you, or uses a cached version at the given path.
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url – The URL of some data
export_path – folder where decompressed file will be exported
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drug2ways.constants.
CSV
= 'csv'¶ csv
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drug2ways.constants.
TSV
= 'tsv'¶ tsv
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drug2ways.constants.
GRAPHML
= 'graphml'¶ graphML
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drug2ways.constants.
BEL
= 'bel'¶ bel
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drug2ways.constants.
NODE_LINK_JSON
= 'json'¶ node link json
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drug2ways.constants.
BEL_PICKLE
= 'pickle'¶ pickle
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drug2ways.constants.
GML
= 'gml'¶ gml
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drug2ways.constants.
EDGE_LIST
= '.lst'¶ edge list
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drug2ways.constants.
FORMATS
= ['csv', 'tsv', 'graphml', 'bel', 'json', 'pickle']¶ drug2ways available network formats
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drug2ways.constants.
FORMAT_SEPARATOR_MAPPING
= {'csv': ',', 'tsv': '\t'}¶ Acceptable column names for the graph
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drug2ways.constants.
SOURCE
= 'source'¶ Column name for source node
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drug2ways.constants.
TARGET
= 'target'¶ Column name for target node
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drug2ways.constants.
RELATION
= 'relation'¶ Column name for relation
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drug2ways.constants.
EMOJI
= '💊🔬'¶ drug2ways emoji